 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.I02660.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Dof |
| Protein Properties |
Length: 358aa MW: 35643.7 Da PI: 8.2186 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.I02660.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 125.4 | 1.8e-39 | 44 | 104 | 2 | 62 |
zf-Dof 2 kekalkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+e+ l+cprCds+ntkfCyynnyslsqPr+fCk+CrryWtkGGalrnvPvGgg+rknk+s+
Pahal.I02660.1 44 PEQGLRCPRCDSSNTKFCYYNNYSLSQPRHFCKTCRRYWTKGGALRNVPVGGGCRKNKRSR 104
67899*****************************************************986 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0010052 | Biological Process | guard cell differentiation |
| GO:0010118 | Biological Process | stomatal movement |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:1902066 | Biological Process | regulation of cell wall pectin metabolic process |
| GO:0005634 | Cellular Component | nucleus |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 358 aa
Download sequence Send
to blast |
MASSTAVAAG DDAVGTRKGG TGGGGGTAPP PATQQQQQPP PPPPEQGLRC PRCDSSNTKF 60
CYYNNYSLSQ PRHFCKTCRR YWTKGGALRN VPVGGGCRKN KRSRSAVAAA AAAAAASSRL 120
SLNLPVEGGV GDQQAAARLG FLGAGGAPVA SSPIGGAPAA DYQQAAGAVG MMALPRLHAA 180
QAVGQYVPFG EWPSGAGGDV SGGGGGHAMN DHAGAVSSSI ASSIESLSFI NQDLHWKLQQ 240
QRLATMFLGP PPPPTSAAAH VDGAPASAAH IGGAFLQMAG PPPGMESTMP AATSWFMDSS 300
YGVLPSPTAH ANNAAAATAI CNVAVSSGRS SGDDDSGTNC GSAIPSWGDM STFAMLP*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC582402 | 1e-134 | KC582402.1 Sorghum bicolor dof5 protein (dof5) gene, complete cds. |
