PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.I02567.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | NAC | ||||||||
Protein Properties | Length: 209aa MW: 21603.7 Da PI: 8.7602 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 25.2 | 4.7e-08 | 8 | 137 | 8 | 127 |
NAM 8 hPtdeelvveyLkkkvegkk....leleevikevdiykvePwdLpk.kvka..eekewyfFskrdkkyatgkrknratksgyWk.at.gkdkevl 93 P+d++l+++ L++ +++ + + + +++ +d+y+v P++L + + a + wyf ++++ +y+ k a +g W +t g +v Pahal.I02567.1 8 APSDHDLITFVLRPMAAAGTgqqgVGVGGFVHMADVYSVAPEKLAErYAPApgTGGIWYFVCPARCRYRA--AKAGALGEGCWTsETgGAIGPVR 100 6************998888765555555579999**********84233233244489999999999964..45557899***954514567888 PP NAM 94 skkgelvglkktLvfykgra...pkgektdWvmheyr 127 +g+ vg + L + +a ++ W+m e + Pahal.I02567.1 101 GLDGRRVGQSRALCYGARTAvpwTAVTRHGWCMVELA 137 889999*******998543311134457789998865 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 19.344 | 1 | 158 | IPR003441 | NAC domain |
Pfam | PF02365 | 2.3E-7 | 8 | 136 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-16 | 8 | 158 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 209 aa Download sequence Send to blast |
MAAAVVRAPS DHDLITFVLR PMAAAGTGQQ GVGVGGFVHM ADVYSVAPEK LAERYAPAPG 60 TGGIWYFVCP ARCRYRAAKA GALGEGCWTS ETGGAIGPVR GLDGRRVGQS RALCYGARTA 120 VPWTAVTRHG WCMVELALDD QDGGGGGEDF VLCKLFRSPR NEASSATAAA AALAAVPALV 180 SSCKRKAAGG NHPEAPPCVR QQLMQRSF* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025791596.1 | 1e-149 | uncharacterized protein LOC112872751 | ||||
TrEMBL | A0A2S3IK74 | 1e-148 | A0A2S3IK74_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J18422.1.p | 1e-103 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4363 | 21 | 58 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.I02567.1 |