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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.I01675.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 260aa MW: 27025.1 Da PI: 4.7441 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.I01675.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 75 | 123 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr + +g+Wv+eIr+p++ + r++lg+f+t+e+Aa+a++ a+++++g
Pahal.I01675.1 75 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFDTPEMAARAHDVAALAIKG 123
9****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 260 aa
Download sequence Send
to blast |
MSLLETASRA RCSSVMEEER ALSPVSDAST TCSSSGGGSG PGSPAASLAS LDDSGAASAA 60 SSRKRPRREL KHPAYRGVRM RAWGKWVSEI REPRKKSRIW LGTFDTPEMA ARAHDVAALA 120 IKGRAAHLNF PEMSHELPRA ASAAPEDVRA AAALAAAMES VAPAAPSDSS HGGAAGSDED 180 EEPAASASPV HDAGNAGGEE KAAPSIEHPV QADGLVLDLA LLDLPDVLLE FGFELALPPT 240 STPCCYDLSW DEPLLLWEH*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU970180 | 1e-133 | EU970180.1 Zea mays clone 341615 dehydration-responsive element-binding protein 1B mRNA, complete cds. |