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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.I01639.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bHLH |
Protein Properties |
Length: 316aa MW: 32273.2 Da PI: 7.6402 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.I01639.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 17.4 | 8e-06 | 165 | 210 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
a n+r r RR+++ +++ L++l+ + +K + a++L +A YI+ L
Pahal.I01639.1 165 ATNKRPRVRREKLGERIIALQQLVSPF-----GKSDTASVLHEALGYIRFL 210
679***********************8.....8****************98 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 316 aa
Download sequence Send
to blast |
MVKEEEIVAE AGGRGYMDLL GLGEEDYLLC LSPSSYFSSS VVSTTTTSAT PAAASSPTCA 60 SYLDLAPAYH HMLSFAGQEQ YHGSDGVFGF QYHGGDQAGI PVAVPQKSSP TTECSSSISS 120 MSSSPPATTI SAISSPKPQA FKKKGSRISD QRKAAPAAVA TTAAATNKRP RVRREKLGER 180 IIALQQLVSP FGKSDTASVL HEALGYIRFL HDQVQALSSP YMQRLPVSAH APAQEGAAGT 240 VVEPPRASDL RSRGLCLVPI SCTEHVAGGG HGHGNGADLW SVAAGAAKAA AENKGAAAAA 300 AGTLPGAGGH PGYLA*
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