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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.I01503.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
NAC |
| Protein Properties |
Length: 345aa MW: 38707.4 Da PI: 6.9368 |
| Description |
NAC family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.I01503.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | NAM | 166.2 | 1.1e-51 | 36 | 164 | 2 | 128 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk 95
pGfrFhPtdeelv++yL++kv++k+l++ e+ike+diyk++PwdLp ++++++ekewyfF+ r +ky+++ r+nr+t sg+Wkatg d++++s+
Pahal.I01503.1 36 LPGFRFHPTDEELVTFYLRRKVARKPLSI-EIIKEMDIYKHDPWDLPkASTAGGEKEWYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDRPIYSA 129
69***************************.89***************556667899*************************************99 PP
NAM 96 ..kgelvglkktLvfykgrapkgektdWvmheyrl 128
+ge +glkk+Lv+y+g+a kg+ktdW+mhe+rl
Pahal.I01503.1 130 tsSGESIGLKKSLVYYRGSAGKGTKTDWMMHEFRL 164
888899***************************98 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0005992 | Biological Process | trehalose biosynthetic process |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0006561 | Biological Process | proline biosynthetic process |
| GO:0009718 | Biological Process | anthocyanin-containing compound biosynthetic process |
| GO:0010120 | Biological Process | camalexin biosynthetic process |
| GO:0042538 | Biological Process | hyperosmotic salinity response |
| GO:1900056 | Biological Process | negative regulation of leaf senescence |
| GO:0003677 | Molecular Function | DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 345 aa
Download sequence Send
to blast |
MVAKEFGREV ISMDKVKTDG EALIAAGDEE EDDVVLPGFR FHPTDEELVT FYLRRKVARK 60
PLSIEIIKEM DIYKHDPWDL PKASTAGGEK EWYFFCLRGR KYRNSIRPNR VTGSGFWKAT 120
GIDRPIYSAT SSGESIGLKK SLVYYRGSAG KGTKTDWMMH EFRLPPAATA ANSSPSMQEA 180
EVWTICRIFK RNITYKRQQP QQVWRQPVAT GTCLPPADSS SNTGSFESDG GDEYMNCLPA 240
AAPSVPRQHH FSNQINMLNG GGGGGFFRDS VHSHQQFQGQ WFNSLPAPAI EQKPQLNSPA 300
TTIAFHQNDQ SLAANDCYKD GYWDEIARFM EVNDPAVFYD CRYA*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 1ut4_A | 1e-48 | 37 | 192 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut4_B | 1e-48 | 37 | 192 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_A | 1e-48 | 37 | 192 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
| 1ut7_B | 1e-48 | 37 | 192 | 19 | 166 | NO APICAL MERISTEM PROTEIN |
| 3swm_A | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swm_B | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swm_C | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swm_D | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swp_A | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swp_B | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swp_C | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 3swp_D | 1e-48 | 37 | 192 | 22 | 169 | NAC domain-containing protein 19 |
| 4dul_A | 1e-48 | 37 | 192 | 19 | 166 | NAC domain-containing protein 19 |
| 4dul_B | 1e-48 | 37 | 192 | 19 | 166 | NAC domain-containing protein 19 |
| Search in ModeBase |
| Functional Description ? help
Back to Top |
| Source |
Description |
| UniProt | Transcription factor that binds to the 5'- RRYGCCGT-3' consensus core sequence. Central longevity regulator. Negative regulator of leaf senescence. Modulates cellular H(2)O(2) levels and enhances tolerance to various abiotic stresses through the regulation of DREB2A. {ECO:0000269|PubMed:22345491}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated by H(2)O(2), paraquat, ozone, 3-aminotriazole and salt stress. {ECO:0000269|PubMed:22345491}. |
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | BT055579 | 1e-180 | BT055579.1 Zea mays full-length cDNA clone ZM_BFc0046N12 mRNA, complete cds. |
| GenBank | HQ858689 | 1e-180 | HQ858689.1 Zea mays clone UT1145 NAC transcription factor mRNA, partial cds. |
| Publications
? help Back to Top |
- Shahnejat-Bushehri S,Nobmann B,Devi Allu A,Balazadeh S
JUB1 suppresses Pseudomonas syringae-induced defense responses through accumulation of DELLA proteins.
Plant Signal Behav, 2016. 11(6): p. e1181245
[PMID:27159137] - Shahnejat-Bushehri S,Tarkowska D,Sakuraba Y,Balazadeh S
Arabidopsis NAC transcription factor JUB1 regulates GA/BR metabolism and signalling.
Nat Plants, 2016. 2: p. 16013
[PMID:27249348] - Shahnejat-Bushehri S, et al.
Arabidopsis NAC Transcription Factor JUNGBRUNNEN1 Exerts Conserved Control Over Gibberellin and Brassinosteroid Metabolism and Signaling Genes in Tomato.
Front Plant Sci, 2017. 8: p. 214
[PMID:28326087] - Sakuraba Y,Bülbül S,Piao W,Choi G,Paek NC
Arabidopsis EARLY FLOWERING3 increases salt tolerance by suppressing salt stress response pathways.
Plant J., 2017. 92(6): p. 1106-1120
[PMID:29032592] - Ebrahimian-Motlagh S, et al.
JUNGBRUNNEN1 Confers Drought Tolerance Downstream of the HD-Zip I Transcription Factor AtHB13.
Front Plant Sci, 2017. 8: p. 2118
[PMID:29326734]
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