PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.I01277.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | NAC | ||||||||
Protein Properties | Length: 257aa MW: 27461.4 Da PI: 6.5064 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 25 | 5.2e-08 | 8 | 141 | 7 | 127 |
NAM 7 FhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpk..........kvkaeekewyfFskrdkkyatgk....rknratksgy.Wkat 86 F+P+d+ L +++++ +++l ++++++d++++ P dL + + + w f+++++ k+a+gk r++ ++ +g+ W++ Pahal.I01277.1 8 FRPRDDASSI-ALLRSLRSGDVDL-SFVHRADVCSAAPADLVAnlepvpgtdlDQGGYNAIWLFYCPKRFKNAQGKpsghRQRAIAGDGTcWHSE 100 7788776553.4667788888888.88**************744778887754222344589******99999655444266666666655**** PP NAM 87 gkdkevlskkgelvglkktLvfy...kgrapkgektdWvmheyr 127 k+v+ + + L + g++++ ++ W+m ey Pahal.I01277.1 101 AGPKPVKGLD---GATLSNLSYGrkeGGSSRSFNRMGWCMTEYD 141 ******8844...4566788887443357777889********5 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 14.213 | 2 | 161 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 8.5E-14 | 8 | 161 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 257 aa Download sequence Send to blast |
MSAEDGSFRP RDDASSIALL RSLRSGDVDL SFVHRADVCS AAPADLVANL EPVPGTDLDQ 60 GGYNAIWLFY CPKRFKNAQG KPSGHRQRAI AGDGTCWHSE AGPKPVKGLD GATLSNLSYG 120 RKEGGSSRSF NRMGWCMTEY DDKHGGGGSG GDHVLCKIYR SSSSLAKAGK SKPPTTQRSS 180 GCKRKATGDE PQARPTKTSH KQACAGVDQE EFLLTDQQMA IPEPESLLPT EEEQFQDNTL 240 FTFQELLGGP GYGDTG* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A2T7BYX4 | 0.0 | A0A2T7BYX4_9POAL; Uncharacterized protein | ||||
STRING | Pavir.J03710.1.p | 1e-158 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP4574 | 6 | 32 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.I01277.1 |