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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.I00790.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 296aa MW: 31616.3 Da PI: 6.8814 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.I00790.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 113 | 162 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr p++ r+r +lg+f+taeeAa a++ a+ +l+g
Pahal.I00790.1 113 LYRGVRQRH-WGKWVAEIRLPRN---RTRLWLGTFDTAEEAALAYDSAAFRLRG 162
59******9.**********955...5*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 296 aa
Download sequence Send
to blast |
MATTIDWHGR SAALPAALYE MADTKELVRA LAAPPVQHQQ PPTISFAYPC SGGVEQQRAT 60 SSLLGAGAGG LTPAQVLQVQ SQFQFLRRPA AVATQPMKRQ APAPLPARPV SKLYRGVRQR 120 HWGKWVAEIR LPRNRTRLWL GTFDTAEEAA LAYDSAAFRL RGDSARLNFP DLRRGGAHLG 180 PPLHAAVDAK LHAICNGTDV APQNQSQSQS NTTVATAATA PSTFSSASPD VKSEPGCSGS 240 ESSSSADGDV SSTGSSDVVP EMQLLDFSEA PWDESESFHL RKYPSLEIDW DSILS*
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