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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.I00707.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 297aa MW: 31767 Da PI: 4.2741 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.I00707.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59 | 1.2e-18 | 67 | 117 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
s+y+GVr+++ +g+W+Ae+rdp+ r r++lg+f tae Aa+a++ a++ l+g
Pahal.I00707.1 67 SQYHGVRQRP-WGKWAAEVRDPV----RgVRVWLGTFATAEAAARAYDDAARDLRG 117
78********.**********63....56************************998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 297 aa
Download sequence Send
to blast |
MCGGAILAEL IPSGGRRGAP AAAAKDDDFE AAFQEFDEDS EEEVVMLTER KAFALGAAGA 60 RRNRRPSQYH GVRQRPWGKW AAEVRDPVRG VRVWLGTFAT AEAAARAYDD AARDLRGAGA 120 KLNFPSSDTA RTRKRRAAVK PTPYVDLVDG DDALGTHAPS VKNEAAETCG TISGDSSCGS 180 LPEFSWQGMS ATDDVVARPD ADFRVEPDMS VELGCPSKRA RTEPQEEEVV APPAAAEGSA 240 ALLFDAFMFG DQFSFFDGGA YESLDGLFGG DAVESNQSAV LWSFDDDRLV EDTMCY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT087688 | 2e-59 | BT087688.1 Zea mays full-length cDNA clone ZM_BFb0158A18 mRNA, complete cds. |
GenBank | JX469918 | 2e-59 | JX469918.1 Zea mays subsp. mays clone UT3174 AP2-EREBP-type transcription factor mRNA, partial cds. |