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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.I00611.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 314aa MW: 33007.9 Da PI: 6.3437 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.I00611.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63 | 6.6e-20 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr++ +g+WvAeIr+p +kr+r +lg+f taeeAa a+++a+++l+g
Pahal.I00611.1 28 EYRGVRQRT-WGKWVAEIREP---NKRTRLWLGSFATAEEAALAYDEAARRLYG 77
69****999.**********9...337*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 314 aa
Download sequence Send
to blast |
MESYGGRKRA WKKGPTRGKG GPQNAACEYR GVRQRTWGKW VAEIREPNKR TRLWLGSFAT 60 AEEAALAYDE AARRLYGPDA FLNLPHLRAS VTAAAAAHQR LRWLPASARG AAAAAVPAYG 120 LLNLNAQHNV HVIHQRLQEL KNGASPTKPP QGGARVTPHQ LGPPLPASTS PCSTVTNGGV 180 AAHAALPPPM SCFQALEQAV ATATMAADDD TDPCEGACPG ADKPQLDLRE FLQQIGVLKD 240 DEDGAATKGS FHGDGEVGFG GNGEFDWDAL AADLNDIAGG HGGAVGVNGG FQMDDLHEVD 300 QFGSCLPIPV WDV*
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Functional Description ? help
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Source |
Description |
UniProt | Probable transcriptional activator that binds to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). {ECO:0000250}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: Not induced by high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727874 | 0.0 | KJ727874.1 Zea mays clone pUT5967 AP2-EREBP transcription factor (EREB38) gene, partial cds. |