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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.H02089.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 258aa MW: 27921.9 Da PI: 5.1818 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.H02089.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 51.3 | 3e-16 | 97 | 146 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ GVr ++ +g+++AeIrd + +g +r++lg+f+t+e Aa a+++a+ + +g
Pahal.H02089.1 97 FIGVRKRP-WGKFAAEIRDSTRRG--ARVWLGTFDTPEAAALAYDHAAYAARG 146
57******.**********43343..**********************99998 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 258 aa
Download sequence Send
to blast |
MEHVHCTSYS YSYCYPAEAP AATASLPFDT ADGDEMYMQL NALLLQMEAD DESSDSFSSS 60 SPASSSEAGT ASATTSDEQP WRESSSTAEE RWRPEAFIGV RKRPWGKFAA EIRDSTRRGA 120 RVWLGTFDTP EAAALAYDHA AYAARGAAAV LNFPVERVRE SLGALALSVS AGNSPVLALK 180 RRHSKRTRRS KLSAASSSLK TQRQPTTTLH FSGVSVMDVV VPQRHEASPC SYGTVELEDL 240 GADSLEELLR VSSELQF*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727683 | 2e-90 | KJ727683.1 Zea mays clone pUT5611 AP2-EREBP transcription factor (EREB59) gene, partial cds. |
Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT2G31230.1 | 7e-23 | ethylene-responsive element binding factor 15 |