PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.H00902.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | NAC | ||||||||
Protein Properties | Length: 259aa MW: 27316.2 Da PI: 7.6362 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 64.6 | 2.9e-20 | 12 | 149 | 1 | 128 |
NAM 1 lppGfrFhPtdeelvveyLkkkvegkk.leleevikevdiykvePwdLpkkvkaeek.ewyfFskrdkkyatgkrknratk..sgyWk.atgkdk 90 lp ++F+Ptd ++v +yL ++++g + + ++++ e d +++ Pw+L +++ ++ + + +f + +a+g r+ r ++ g W+ ++g++ Pahal.H00902.1 12 LPSACKFDPTDADIVAHYLLPRAAGVPdPPYAHAVIEDDTCSCPPWELLRRHGHGGSdHAFFVGPPGDPAANGGRACRRVRggGGLWRrQKGEES 106 57889********************9954555668888**********85554444427788888888899999999966645789*95678888 PP NAM 91 evlsk.....kgel....vglkktLvfykgrapkgektdWvmheyrl 128 +++++ + + + L++y+ a +++ + Wvmhey++ Pahal.H00902.1 107 DLVVArggrgG--AelrlRYRRYNLAYYR--AGDPSTSGWVMHEYHI 149 88777555541..14555889999****5..555569********96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 8.76E-27 | 9 | 165 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 24.242 | 12 | 166 | IPR003441 | NAC domain |
Pfam | PF02365 | 5.3E-13 | 14 | 149 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 259 aa Download sequence Send to blast |
MEASRFGFDP SLPSACKFDP TDADIVAHYL LPRAAGVPDP PYAHAVIEDD TCSCPPWELL 60 RRHGHGGSDH AFFVGPPGDP AANGGRACRR VRGGGGLWRR QKGEESDLVV ARGGRGGAEL 120 RLRYRRYNLA YYRAGDPSTS GWVMHEYHIL RPKLLPGAVL SRIRITDKGK EERKKQQEAA 180 AAAAKKVAPG PAHQPGRSNY LVDDHAAAVA SDAEGTSSGA QSGVIPQGDD GNGDGGGVGE 240 TTGGYRTNFL SVGEGDGY* |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025827520.1 | 0.0 | NAC domain-containing protein 10-like | ||||
TrEMBL | A0A2S3ICU6 | 0.0 | A0A2S3ICU6_9POAL; Uncharacterized protein | ||||
STRING | Si027836m | 6e-83 | (Setaria italica) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14301 | 19 | 26 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G61110.1 | 3e-06 | NAC domain containing protein 25 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.H00902.1 |