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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.G02941.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 216aa MW: 23142.1 Da PI: 7.2538 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G02941.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.4 | 2e-19 | 53 | 103 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+y+G+r+++ +g+W+AeIrdp+ + r++lg++ tae Aa+a+++a+++++g+
Pahal.G02941.1 53 QYRGIRQRP-WGKWAAEIRDPV----KgVRVWLGTYPTAEAAARAYDRAARRIRGA 103
6********.**********75....44*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MCGGAIIFDY IPARRRVSAA DFWPDSEADA EDPHAPRASG ERAPRAKRCR KNQYRGIRQR 60 PWGKWAAEIR DPVKGVRVWL GTYPTAEAAA RAYDRAARRI RGAKAKVNFP NDTSSPVPVP 120 PAAAAAPPPA TAPAVLPAPK AEAGFSDEVK ELSEELMAYE NYMNFLGIPY MEGGSAAAPA 180 AAAVPAAAEE PQAPVPTGLW SFEDYYPASL SLFTE*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU952280 | 1e-131 | EU952280.1 Zea mays clone 1275260 ethylene-responsive factor-like protein 1 mRNA, complete cds. |