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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.G02195.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Trihelix |
| Protein Properties |
Length: 272aa MW: 31824.4 Da PI: 7.5141 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.G02195.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 75.1 | 1.2e-23 | 18 | 100 | 1 | 86 |
trihelix 1 rWtkqevlaLiearremeerlrr.gklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
+W qe+++Li+ar e+e++ + ++++k+ We+v+ ++rerg++r++ qCk+kw+nl +ryk ++++ ++ ++cp+f++l+
Pahal.G02195.1 18 QWGAQETRELIAARGEVEREADAaRRSAKTMWEAVAVRLRERGYRRTADQCKCKWKNLVNRYKGKETSDPEN----GRQCPFFEELH 100
7********************9735799************************************99999974....678******98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 272 aa
Download sequence Send
to blast |
MMEAGGGGAG GRDERVPQWG AQETRELIAA RGEVEREADA ARRSAKTMWE AVAVRLRERG 60
YRRTADQCKC KWKNLVNRYK GKETSDPENG RQCPFFEELH AVFTERARNM QRQLLESESG 120
AFDKRKLKRP SGDRSSGESD GEDDGGEESE DEKPMHSRKR KADDKKQQSQ RMPEKSRSGV 180
SSIHELLQDF LTQQQRIDIQ WQETMERRAQ ERVAFEQEWR QTMQKLEQER LMLEHSWIQR 240
EEQRRMREEA RAEKRDALLT TLLNKLLQDD L*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 122 | 129 | DKRKLKRP |
