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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G01833.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 216aa MW: 22853.2 Da PI: 6.026 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G01833.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.9 | 1.2e-18 | 44 | 93 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
y+GVr ++ +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++ a+++++g
Pahal.G01833.1 44 TYRGVRMRS-WGKWVSEIREPRK---KSRIWLGTFATAEMAARAHDVAALAIKG 93
69****998.**********843...6***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 216 aa
Download sequence Send
to blast |
MDTDDTHEPA SPTSASSSSS SSSGPSSSQA PKKRARQDGR RHPTYRGVRM RSWGKWVSEI 60 REPRKKSRIW LGTFATAEMA ARAHDVAALA IKGRGAHLNF PEQAHLLPRP ASASPKDVQA 120 AATLAAAADF PAPPPPPSTS RGGANAKSPE SSSSDDASRE PAPQDAGPDP DETLFDLPDL 180 LMDLRCCGPS SWAVDDDVAG GGAFRLIEEP LLWEY*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU965306 | 1e-126 | EU965306.1 Zea mays clone 285154 dehydration-responsive element-binding protein 1C mRNA, complete cds. |