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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G01813.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 344aa MW: 36062.5 Da PI: 4.8323 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G01813.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 62.7 | 7.7e-20 | 151 | 201 | 3 | 56 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
Pahal.G01813.1 151 YRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 201
9*******.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 344 aa
Download sequence Send
to blast |
MAFTGDADGF ALDFIREHLL GGGCGGVAAA DSPVVSDDVN VPELPPQPEF EPMSFLPPRQ 60 EQHHQGFMGM DDLMTDEYMG GAPAVGEAAA FPEQVPAAPV IIKFGSERSP AVRQPLTIAV 120 PPSSFAWAGA ASAATPAAPA AAAVVEDFRM YRGVRQRPWG KYAAEIRDPK RRGSRVWLGT 180 YDTPVEAARA YDRAAFRMRG AKAILNFPNE VGTRDADFLA SPPAPATKAA AATSKRKRKQ 240 LENSDDVEVV AVVNKAVKVD APSSSSTQVS SSTSPSSMST RETTASSTVT STTAETGAGA 300 EWLPMTPSSG SCEQYWEALL GGLPPLSPLS PIPTLGFPQL PVS*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 1e-116 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |