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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G01812.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 322aa MW: 34433.6 Da PI: 6.1467 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G01812.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.7 | 3.8e-20 | 138 | 189 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
Pahal.G01812.1 138 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFRMRGA 189
8********.**********96554..**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 322 aa
Download sequence Send
to blast |
MDFAADSDGF ALDFIREHLL DGGCGGVPVP VGSTGVPDDV TFPMLQPQPE FQPMSSFLPP 60 PLQQGYTHLT HEYKGAAPAA AAAASRAQYE LSATVMIKFG SEPSSPVRPA LTITVPPSSY 120 AWAESVTAAA AVDDDFRKYR GVRQRPWGKY AAEIRDPKRR GSRVWLGTYD TPVEAARAYD 180 RAAFRMRGAK AILNFPNEVG TRGADLWAPP QPPAATQAAP ANKRKRQQEE RDVEVLAVIN 240 KAVKIEMPSS SSTWPSSMST RETTASASST VTSTTTEAAG AGADWLPVTP SSGSWDQYWD 300 LGGLPPLSPH PAMGFPQLTV N*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 1e-104 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |