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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G01811.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 335aa MW: 35812.3 Da PI: 5.8336 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G01811.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.2 | 5.4e-20 | 143 | 194 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+y+GVr+++ +g+++AeIrdp+ +g r++lg+++t+ eAa+a+++a+ +++g+
Pahal.G01811.1 143 KYRGVRQRP-WGKYAAEIRDPKRRG--SRVWLGTYDTPVEAARAYDRAAFQMRGA 194
8********.**********96554..*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 335 aa
Download sequence Send
to blast |
MEFIGDADRF GLDFIRDLLL GGDGRVAPVA SPAVSDDVTF PVLQPQPELQ PMPSFLPQQY 60 QQQHQGYIDL TREYMVAPPA APAVGEAAFR AQEPALVMIK FGSEPPSPVS VRPPLSISVP 120 PSSYAWAAAA PAAAPAAVED YRKYRGVRQR PWGKYAAEIR DPKRRGSRVW LGTYDTPVEA 180 ARAYDRAAFQ MRGAKAILNF PNEVGTRGAD LWGPPPPPAP ATQAAAAANK RKRNHREDPD 240 DVEVVAVVNK AVKREEAPPP PSTQVSSTSP SSMSTRETTA SSTVTSTATE TGAGAETPSS 300 GSWEQYWEAL LGGLPPLSPL SPHPTLGFPQ LIVN*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KJ727525 | 1e-100 | KJ727525.1 Zea mays clone pUT5385 AP2-EREBP transcription factor (EREB61) gene, partial cds. |