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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G01739.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
E2F/DP |
Protein Properties |
Length: 472aa MW: 50920.7 Da PI: 5.1297 |
Description |
E2F/DP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G01739.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | E2F_TDP | 79.7 | 2.6e-25 | 189 | 254 | 1 | 71 |
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71
r+++sL llt+kf++ll+ +e+g+++ln++a++L +v ++RRiYDi+NVLe+++liek kn irwkg
Pahal.G01739.1 189 RYDSSLSLLTKKFINLLQGAENGTLDLNKAAETL---EV--QKRRIYDITNVLEGVDLIEKGLKNMIRWKG 254
6899******************************...99..****************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0005667 | Cellular Component | transcription factor complex |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 472 aa
Download sequence Send
to blast |
MDGGSSSLPL PHPPPQVYLR RPVPPPGPPV TAPPRVHLFR PPVPIPIFSS RPRAAARPPI 60 PPAAAAPAPT PAPPPQVAAA PGPPRPPPAA PTSTDMPPPP PDQPQAGLML PPPAPKAAGE 120 GTPMPNPQPN EQNNGGETAK DKETTSEPVK VIKRVKKLKV SKQSVVTSDG SGAVEGDAGP 180 SLHSINHCRY DSSLSLLTKK FINLLQGAEN GTLDLNKAAE TLEVQKRRIY DITNVLEGVD 240 LIEKGLKNMI RWKGFDMSKP KEIECQISSL KEELESLYDE ESRLDDEIRE AKEKLQALTL 300 DEDKRKSLYL LKEDINKIPH FQGSTLIAIN APHGTCVEVP DPNADLYLYG DLGLQEKHYK 360 IVLRSSMGPI DCYLISDQQE IFNPDQQVAA GKLEPVIATG SSQAVQQMDS DPNQTPEKGQ 420 SNAVCTHTSE PSRKHEIMSG ILRIVPSDAD ADSDYWLASD VDVSMTDAWG T*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | BT064737 | 0.0 | BT064737.1 Zea mays full-length cDNA clone ZM_BFb0090H09 mRNA, complete cds. |
GenBank | KJ726878 | 0.0 | KJ726878.1 Zea mays clone pUT3419 E2F-DP transcription factor (E2F5) mRNA, partial cds. |