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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.G00823.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
Trihelix |
| Protein Properties |
Length: 329aa MW: 35660.6 Da PI: 8.8991 |
| Description |
Trihelix family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.G00823.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | trihelix | 80.6 | 2.2e-25 | 20 | 113 | 1 | 82 |
trihelix 1 rWtkqevlaLiearremeerlr.rgk..............lkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcp 80
rWt+qe+l+Lie++r +e++ r rg+ ++ ++W++v++++r++g+ r+p+qC+++w+nl+++ykki+e+e++ +++++ +
Pahal.G00823.1 20 RWTRQEILVLIEGKRVVERSGRgRGRgrgparvggdgaggAEPTKWAAVAEYCRRHGVDRGPVQCRKRWSNLAGDYKKIREWERGFAARKE---A 111
8****************99999533355778888888888********************************************9744433...3 PP
trihelix 81 yf 82
f
Pahal.G00823.1 112 SF 113
34 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0050777 | Biological Process | negative regulation of immune response |
| GO:0071219 | Biological Process | cellular response to molecule of bacterial origin |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003677 | Molecular Function | DNA binding |
| GO:0042803 | Molecular Function | protein homodimerization activity |
| Sequence ? help Back to Top |
| Protein Sequence Length: 329 aa
Download sequence Send
to blast |
MSNAGEARGV GTGRGSRLPR WTRQEILVLI EGKRVVERSG RGRGRGRGPA RVGGDGAGGA 60
EPTKWAAVAE YCRRHGVDRG PVQCRKRWSN LAGDYKKIRE WERGFAARKE ASFWAMRNDA 120
RRERRLPGFF DREVYDILEG RAVGNAAASA ASAARPAVVD VESKEEVTAA LDCGRGADGA 180
GLFSSSEDED YQEDDAATPS PTPAPALAPE PVALPISEKT TDVPRQESSE QGTSKRKQPE 240
QMTEDSPAQC GQKRQRSDDN ASGRAAMTNL QGQLVEILDR SSQMVAAQLE AQNINSRLDR 300
EQRKEQVSSL LGVLGKVADA LYRIADKL*
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