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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G00819.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 419aa MW: 44327.1 Da PI: 9.972 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G00819.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 65.1 | 1.4e-20 | 187 | 236 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr+++ +g+W+AeIrdp+ + +r++lg+f+tae+Aa a+++a+++++g
Pahal.G00819.1 187 HYRGVRQRP-WGKWAAEIRDPK----KaARVWLGTFDTAEDAAIAYDEAALRFKG 236
7********.**********94....45***********************9987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0050832 | Biological Process | defense response to fungus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 419 aa
Download sequence Send
to blast |
LPRRRARGSE VQKLELSPTH ARIDRSSPSD GRRRRQIDRQ LTKVDPRKHG KRPLPADEEE 60 EEPPPPPPAK HEPLDVEEQY HVSQLQGATT FSGGGGSSSS PVGAGPSPEA YAQFYYSARA 120 DHDATAVASA LAHVIRASPD QLPPQAFYAA AAAAGATGHQ QAAPHHPGGH AGAAAAAEEE 180 QAGRRRHYRG VRQRPWGKWA AEIRDPKKAA RVWLGTFDTA EDAAIAYDEA ALRFKGTKAK 240 LNFPERVQGR TDLGFLVTRG IPDRHHHHQH QGAVTLAAMP PPHRHQHQTV VPYPDLMQYA 300 QLLQGGRGGG GGDHHAEAAA AHQAAQAQLM MMARGGGGVN LPFGAASFSP SPSPSSAPQI 360 LDFSTQQLIR PGPPSPAAAM SSGAAPSTPS TSSTTTASSP GGGAWPYGGE HHRNKKDP*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 304 | 311 | GGRGGGGG |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU957062 | 1e-145 | EU957062.1 Zea mays clone 1581709 hypothetical protein mRNA, complete cds. |