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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G00808.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 274aa MW: 28237.4 Da PI: 4.2435 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G00808.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.7 | 1.4e-18 | 36 | 87 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
++y GVr+++ +gr++AeIrdp + + r++lg+f+taeeAa a+++a+++l+g+
Pahal.G00808.1 36 TRYLGVRRRP-WGRYAAEIRDPAT---KERHWLGTFDTAEEAAVAYDRAARSLRGA 87
5799******.**********843...4*************************995 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0009739 | Biological Process | response to gibberellin |
GO:0010030 | Biological Process | positive regulation of seed germination |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MNFSSYFFSS SSSSDKKSSS SSSSKRRQQQ PDANTTRYLG VRRRPWGRYA AEIRDPATKE 60 RHWLGTFDTA EEAAVAYDRA ARSLRGARAR TNFAYPDLPP GSSVTPYLSP DLTSGDNAGQ 120 LLQPFYADPA ASLTAAAQAA NGGGGAGFGL GAGGDYASSY GYSAEDMSAL MDDLAIPDDL 180 PADDYGVDAG GAMDLTSVYG GAIGASNASA GGGGGGWCDA SELSAYGASA TASHGVYFEE 240 GYVHSPLFSP MPAADDACAD GFQLDGSSSS YYY*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU974106 | 0.0 | EU974106.1 Zea mays clone 439808 AP2 domain containing protein mRNA, complete cds. |