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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.G00310.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 205aa MW: 21988.9 Da PI: 5.7507 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.G00310.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 55.3 | 1.6e-17 | 28 | 77 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+y+GVr +k +g+Wv+eIr p g ++r++lg+f +ae+Aa a++ a+++l+g
Pahal.G00310.1 28 QYRGVRKRK-WGKWVSEIRQP---GTKTRIWLGSFESAEMAAVAHDVAALRLRG 77
69****999.**********8...325*************************98 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 205 aa
Download sequence Send
to blast |
MDRMGKKLLM PSVTSSTSSS SSPPQQQQYR GVRKRKWGKW VSEIRQPGTK TRIWLGSFES 60 AEMAAVAHDV AALRLRGRDA QLNFPGCVGW LPRPASARPG DVRAAAAEAA DRVRCDPALL 120 LLQQQAAAAR CRHDELDDLV GAAPGPGAEL LGGSDEEFEL DLGSPRLWAE MAEAMLLDPP 180 GWATGIGDAE VAQCWSHGSL WDAC*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU958160 | 1e-166 | EU958160.1 Zea mays clone 1675695 dehydration-responsive element-binding protein 1D mRNA, complete cds. |