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Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.F02573.3 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
G2-like |
| Protein Properties |
Length: 412aa MW: 42381.9 Da PI: 9.5738 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.F02573.3 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 101.8 | 4.3e-32 | 252 | 305 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt+ LH+rFv+ave LGG+e+AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Pahal.F02573.3 252 PRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQMYRT 305
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 412 aa
Download sequence Send
to blast |
MEARAASAPD LSLHISLPSS AASPPPAPGR LGAAAGGGRG AQPAAGGDPW RRLNGSTAST 60
ELSLSPPPRQ EAAGDVLPWR LRPPAANNAA SSSTSAATAE AASLVPVTVP RLSLDAATEA 120
ARARPINGVP VYSSPRAAGH PFLGAGEYRQ GHPKVGLYNP YHASSWPSSL RSTTTSPAAA 180
PSASDPAAAF LSPSAYHRML SGTGRLHLHG VLADTFRGYG GHHQQQQQHF GSLASARYMP 240
KFPASRRGMR APRMRWTSSL HARFVHAVEL LGGHERATPK SVLELMDVKD LTLAHVKSHL 300
QMYRTVKSTD KPATSSGPVD GGGSGDDDLP DAGQAPSAGE DASPQPFTRR SASSEGAASH 360
AGGDVECSSA EDSDGGRARS GASSRDQWPP PAACNADTHR SVGISSTIEV I*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 5e-16 | 253 | 307 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 5e-16 | 253 | 307 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 5e-16 | 253 | 307 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 5e-16 | 253 | 307 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU935003 | 1e-169 | EU935003.1 Zea mays cultivar B73 kanadi1 (kan1) mRNA, complete cds. |
| GenBank | JX469982 | 1e-169 | JX469982.1 Zea mays subsp. mays clone UT3342 G2-like transcription factor mRNA, partial cds. |
