|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.F01696.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
Trihelix |
Protein Properties |
Length: 330aa MW: 36747.6 Da PI: 4.8768 |
Description |
Trihelix family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F01696.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | trihelix | 55.4 | 1.6e-17 | 27 | 113 | 2 | 86 |
trihelix 2 WtkqevlaLiearremeerlrrgklkkplWeevskkm.......rergfer.spkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86
W++ e+ +Li+a+ e++++l+rg+lk+++Weev++ + ++r + +qC++k+e+l+kry+ ++++ s + +f++++
Pahal.F01696.1 27 WSEVETFHLIDAYDERWTALGRGQLKAQQWEEVAADVaarcaatPGVTVQRkTGTQCRHKLEKLRKRYRTEAARPVT------SLWTFFRRMD 113
*************************************9999976444444459*****************9998875......5899999998 PP
|
Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MAAGAHDDAD EPPRRSALKK SAPAQPWSEV ETFHLIDAYD ERWTALGRGQ LKAQQWEEVA 60 ADVAARCAAT PGVTVQRKTG TQCRHKLEKL RKRYRTEAAR PVTSLWTFFR RMDQLERGPL 120 AVSSAYPPAA GSPTGAASDE EEEEEEEEEE EEEEEEEENE EEEEELVPRN NNTRSINGII 180 REFGSGLAPR HPQLQLQQPP SSITPSTAPP RKRVAYEAFQ AKAAAAAAAA VAADKAKEEE 240 VELFRRPSGR GGANAQLSAV LRDFSEGVMR LERRRMEMQW EIERGWQETE ARHAKMLQDA 300 QRQLRDTVAA SCALPPKKAR RDYGSSGDS*
|