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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.F01674.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bHLH |
Protein Properties |
Length: 379aa MW: 39563.7 Da PI: 5.064 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F01674.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
 |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 45.6 | 1.3e-14 | 139 | 190 | 1 | 55 |
CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+r++h ++Er+RR+++N+ ++ Lr+l+P++ + ++ + a+i A++Y+k+L+
Pahal.F01674.1 139 QRMTHIAVERNRRKQMNEYLAALRSLMPPS---YVQRGDQASIIGGAINYVKELE 190
79****************************...9******************996 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 379 aa
Download sequence Send
to blast |
MALEAVVFSE GLFGSWAMAA APGGGGGWSW GHGESEHGGA MEGVMDLEGG AGAGGYWEVG 60 ASSSVMMQGA DHQEPDGSSA PPLPENGGGG NAAAGGGAGF SQEVAVAAAA VAMSPPPASG 120 RRKRRRTRSV KNREEVESQR MTHIAVERNR RKQMNEYLAA LRSLMPPSYV QRGDQASIIG 180 GAINYVKELE QLLQSLEARK HARRHDLSPG DGDAAAGPFA GFFTFPQYSM SARAVARSPA 240 TGNTPPADGE GPNNADADAN NGDGDHDASG SRLSSVADVE VTMVESHASL KLLSRRRPRQ 300 LLRLVAGLQR RRLTVLHLNA TSDARRMALY SLSLKVEDDC ALSSVDDIAA AVHGIVEAVD 360 REEGGAEPLG SQAEEEEE*
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Nucleic Localization
Signal ? help
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 |
No. |
Start |
End |
Sequence |
1 | 121 | 125 | RKRRR |
2 | 121 | 126 | RKRRRT |
3 | 139 | 150 | RMTHIAVERNRR |