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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Pahal.F01627.1 |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
bZIP |
| Protein Properties |
Length: 356aa MW: 37487.5 Da PI: 8.4252 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.F01627.1 | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 45.4 | 1.7e-14 | 277 | 328 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56
+r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N +L+k+ ee+ ++
Pahal.F01627.1 277 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNAELQKKQEEIMEMQ 328
79*******************************************9999986 PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0009738 | Biological Process | abscisic acid-activated signaling pathway |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 356 aa
Download sequence Send
to blast |
MDLKDGERRG AAGPGPLSRQ GSIYSLTFDE FQSTLGGMGG GLGKDFGSMN MDELLRSIWT 60
AEESQAMALA SASASAAGAA GEDGAALQRQ GSLTLPRTLS VKTVDEVWRD FVREGPPPGT 120
AGGAEPQPSR QPTLGEMTLE EFLVRAGVVR DNPAAAAMAA AVPAQPVAPR PIQAVSNGAS 180
IFFGNFGAAN DAGAGAMGFA PVRIEDQGMG NGLMPGVAGM PSAAVTVSPV DTSVAQLDSV 240
GKGNGDLSSP MAPVPYPFEG VIRGRRSGAG VEKVVERRQR RMIKNRESAA RSRARKQAYT 300
MELEAEVQKL KELNAELQKK QEEIMEMQKN QVLEVVSNPY AQKKRCLRRT LTGPW*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT039652 | 0.0 | BT039652.1 Zea mays full-length cDNA clone ZM_BFc0037E11 mRNA, complete cds. |
| GenBank | EU964768 | 0.0 | EU964768.1 Zea mays clone 281458 bZIP transcription factor ABI5 mRNA, complete cds. |
| Publications
? help Back to Top |
- Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
Plant Cell, 2002. 14(12): p. 3177-89
[PMID:12468735] - Kobayashi Y, et al.
Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
Plant J., 2005. 44(6): p. 939-49
[PMID:16359387] - Kobayashi F,Maeta E,Terashima A,Takumi S
Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
Physiol Plant, 2008. 134(1): p. 74-86
[PMID:18433415]
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