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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.F01348.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 167aa MW: 17427.7 Da PI: 10.4927 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F01348.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.3 | 6.2e-21 | 31 | 81 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+ +GVr ++ +gr++AeIrdp r +r++lg+f+t+eeAa+a++aa+++l+g+
Pahal.F01348.1 31 RLRGVRKRP-WGRYAAEIRDP---A-RkARVWLGTFDTPEEAARAYDAAARRLRGP 81
679******.**********8...2.35**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 167 aa
Download sequence Send
to blast |
MAPRRPPSPA GSSSSGGGGS AERAAAEQQP RLRGVRKRPW GRYAAEIRDP ARKARVWLGT 60 FDTPEEAARA YDAAARRLRG PRAATNYPAA PAADEPCPPS SSAADSLPTT AAPARSPYLT 120 ATVPAAPALR QFLPLKGEEE RSRCFPGSSV GLGLDLNLPP PAEMVM*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM493723 | 2e-76 | AM493723.1 Saccharum officinarum mRNA for ethylene responsive transcription factor (ERF3 gene). |