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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.F01347.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 212aa MW: 21688.5 Da PI: 8.1912 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F01347.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 66.6 | 4.7e-21 | 27 | 77 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkr.krfslgkfgtaeeAakaaiaarkklege 56
+ +GVr ++ +gr++AeIrd + r +r++lg+f+t+eeAa+a++aa+++l+g+
Pahal.F01347.1 27 RLRGVRKRP-WGRYAAEIRDpV-----RkARVWLGTFDTPEEAARAYDAAARRLRGP 77
679******.**********44.....55**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 212 aa
Download sequence Send
to blast |
MAPKRSSSPA GSNGSAMCAP AAAEQPRLRG VRKRPWGRYA AEIRDPVRKA RVWLGTFDTP 60 EEAARAYDAA ARRLRGPRAA TNYPAQDPKA AEAAAAPAAS GSAVLSEDAS SSSSSCRDSP 120 LAVTVAVAAP QSQDLSLALP AMVAAQPYQL FLDPTAMVAV APALLQFLPP KSEEEQSFPG 180 SSSSSSVVFD AAPALGLGLD LNLAPPAGMV M*
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Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | AM493723 | 5e-84 | AM493723.1 Saccharum officinarum mRNA for ethylene responsive transcription factor (ERF3 gene). |
GenBank | EU970153 | 5e-84 | EU970153.1 Zea mays clone 340982 ethylene-responsive transcription factor 4 mRNA, complete cds. |
GenBank | EU975388 | 5e-84 | EU975388.1 Zea mays clone 489369 ethylene-responsive transcription factor 4 mRNA, complete cds. |
GenBank | KJ727706 | 5e-84 | KJ727706.1 Zea mays clone pUT5645 AP2-EREBP transcription factor (EREB209) gene, partial cds. |