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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.F01070.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
G2-like |
| Protein Properties |
Length: 352aa MW: 36927.5 Da PI: 7.3528 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.F01070.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.6 | 2.4e-32 | 163 | 216 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
pr+rWt++LH+rFv+ave LGG+++AtPk++lelm+vk+Ltl+hvkSHLQ+YR+
Pahal.F01070.1 163 PRMRWTSTLHARFVHAVELLGGHDRATPKSVLELMDVKDLTLAHVKSHLQMYRT 216
9****************************************************7 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 352 aa
Download sequence Send
to blast |
MELFPSQPDL SLQIGLPTSP TPHDHHHHAA ALSARFFAAA GGGGGNGVGN PAAMPPSLQL 60
PVPLPLPLPV QLPMPPSAAA AAGAAGLYYH PDAAVLRPIR GVPLYQHPHT HAVPPTFPPH 120
SAAPGPCFCE PCHVAAGAWR RAGCGAGARV AGFPPAKRAA RAPRMRWTST LHARFVHAVE 180
LLGGHDRATP KSVLELMDVK DLTLAHVKSH LQMYRTVKNT ERPAASSDQA DGFENGSAGE 240
ICDDNSLDLH GYGGGKPESA AAARHGRLAA CNDHGSSTGA HCALWNSSSR EDWTGFPSES 300
NTGSMHSLKE QMQSKSLEIL SDMNSCVSET TSSTSELNLE FTLGRPQNRP N*
|
| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4r_A | 2e-16 | 164 | 218 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_B | 2e-16 | 164 | 218 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_C | 2e-16 | 164 | 218 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4r_D | 2e-16 | 164 | 218 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Probable transcription factor that regulates abaxial identity during leaf development. {ECO:0000269|PubMed:18594992}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | EU957008 | 0.0 | EU957008.1 Zea mays clone 1580405 KANADI-like transcription factor FEATHERED mRNA, complete cds. |
