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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.F00906.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 245aa MW: 26021.8 Da PI: 10.9808 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.F00906.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 63.1 | 5.9e-20 | 84 | 134 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkklege 56
+++GVr+++ +grW+AeIrdp + r+r +lg+f taeeAa+a++ a +l+g+
Pahal.F00906.1 84 HFRGVRRRP-WGRWAAEIRDPHN---RRRLWLGTFNTAEEAAAAYDTASIRLRGA 134
69*******.**********732...4*************************985 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 245 aa
Download sequence Send
to blast |
MGPNPSLQQL AAAAAEVAMT VSEPPLQPRA RVVRILVHDA DATDSSSSDD EAPPPPPRRA 60 RGGSSSVGAK RRVMEAVGAN PPVHFRGVRR RPWGRWAAEI RDPHNRRRLW LGTFNTAEEA 120 AAAYDTASIR LRGASARTNF PSARYPPPSE PAKPIISLTP EPGKVITLPP VPVKPTVPLQ 180 VKKEGGSYNG QVEGGSSELK AFAPKPMWEM IPGKRKKRPG CGNGSCLRIA IRAASVCVEE 240 VGGA*
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