PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum

Family

bZIP

Protein Properties

Length: 311aa MW: 33612.4 Da PI: 6.6804

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Pahal.E04425.1	genome	JGI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	35.7	1.9e-11	178	223	5	50
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e ++L ++ Pahal.E04425.1 178 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQTEVSTLSPRVA 223 8999*********************************999987765 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	8.0E-14	174	238	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.772	176	232	IPR004827	Basic-leucine zipper domain
Pfam	PF00170	2.7E-10	178	229	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	4.3E-14	178	232	No hit	No description
SuperFamily	SSF57959	1.41E-11	178	232	No hit	No description
CDD	cd14703	1.61E-24	179	229	No hit	No description
PROSITE pattern	PS00036	0	181	196	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0045893	Biological Process	positive regulation of transcription, DNA-templated
GO:0005634	Cellular Component	nucleus
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 311 aa Download sequence Send to blast
MAQLPPKIPA MAPAWPEFGG GHHHHHHQRS PSVGTFLAAP MPPLPPPQQH QQQPSWVEEF 60 LDFTAAKRGA HRRTVSDSVA FLEPGPDDGN AGVGAHDFDR LDDDQLLSMF SDDLPPPPQQ 120 QAAPAPAPVA SSSSPSDHNS INDEKTDRGE TEEAQSNCHG DAAAVPGQPA SAAAVDPKRV 180 KRILANRQSA QRSRVRKLQY ISELERSVTS LQTEVSTLSP RVAFLDHQRS LLTLGNSHLK 240 QRIAALAQDK IFKDAHQEAL KKEIERLRQI YHQQSLKNAE SSPTADAAPI RGDKDLIASE 300 GTAAPCPPPS *

Functional Description ? help Back to Top
Source	Description
UniProt	Transcription regulator. {ECO:0000250}.

Regulation -- Description ? help Back to Top
Source	Description
UniProt	INDUCTION: Down-regulated by dehydration and salt stress. {ECO:0000269\|PubMed:18065552}.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_025817786.1	0.0	basic leucine zipper 2-like
Swissprot	Q5QNI5	1e-109	BZP02_ORYSJ; Basic leucine zipper 2
TrEMBL	A0A2S3HYX3	0.0	A0A2S3HYX3_9POAL; Uncharacterized protein
TrEMBL	A0A2T7DSS5	0.0	A0A2T7DSS5_9POAL; Uncharacterized protein
STRING	Pavir.J05339.1.p	1e-171	(Panicum virgatum)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Monocots	OGMP1322	38	125

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	2e-91	bZIP family protein

Link Out ? help Back to Top
Phytozome	Pahal.E04425.1

Publications ? help Back to Top
Kikuchi S, et al. Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764]