 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.E02849.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
FAR1 |
| Protein Properties |
Length: 274aa MW: 32096.7 Da PI: 9.751 |
| Description |
FAR1 family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.E02849.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | FAR1 | 37.3 | 8.8e-12 | 101 | 179 | 4 | 90 |
FAR1 4 neYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90
n Y++ F v + +++k+ +k+ ++C+++ k++e k+ +k+r++ ++ t+Ck k+ v ++ dgk + t+++l HnH+l+
Pahal.E02849.1 101 NVYGQLYRFAVYRGRNYKN------KKYFLMCNRSKKAKEPKNI-QKKRKRYIVKGTNCKMKVIVALQ-DGKCRFTDVDLVHNHDLV 179
67999999*******9999......5789******999998887.9999999****************.****************97 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 274 aa
Download sequence Send
to blast |
MLVITTSVEL NQSEEVNRVP KIKDIDDEMN AEKEIERNEN CHQDDLDVSE ENLEMSNDNG 60
EGTVAEDDEY LFPNPDEAEG MKKPLIGMSF DTIDEAHKIV NVYGQLYRFA VYRGRNYKNK 120
KYFLMCNRSK KAKEPKNIQK KRKRYIVKGT NCKMKVIVAL QDGKCRFTDV DLVHNHDLVS 180
SPALTKFFIS HRYMSEEEKN FSRILQEARI KPRRIMQIFK KMKGSFRYVN FGKTNINNLK 240
QADRRARLRN SDIDSTMVFV RKMQKRNQVS MTQ*
|
| Nucleic Localization
Signal ? help
Back to Top |
 |
| No. |
Start |
End |
Sequence |
| 1 | 134 | 142 | PKNIQKKRK |
| 2 | 207 | 215 | ARIKPRRIM |
