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PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Pahal.E02800.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family | bZIP | ||||||||
Protein Properties | Length: 137aa MW: 15037 Da PI: 7.9172 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 41.2 | 3.6e-13 | 36 | 94 | 5 | 63 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklksev 63 ++ +rk++NR++A+rsR+RK+++++ L++ v +L a N a++ + + +a++++e+ Pahal.E02800.1 36 RKRKRKESNRLSAQRSRARKQQQLDDLTNQVTALRARNGAMAAAAYDVERRCAAVQAEN 94 6789************************************************9998887 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 5.4E-10 | 32 | 96 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 2.8E-8 | 34 | 76 | No hit | No description |
PROSITE profile | PS50217 | 9.806 | 34 | 97 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.22E-8 | 36 | 78 | No hit | No description |
Pfam | PF00170 | 3.5E-9 | 36 | 90 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 2.55E-12 | 37 | 88 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 39 | 54 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 137 aa Download sequence Send to blast |
MASPSMVSAV TTSPSTGSEP EAPCCDPQLA AVTAERKRKR KESNRLSAQR SRARKQQQLD 60 DLTNQVTALR ARNGAMAAAA YDVERRCAAV QAENALLQAM NLELGERLQS LTELIQCMEA 120 AMYHQPQLLD ANMYYY* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 35 | 40 | RKRKRK |
2 | 35 | 41 | RKRKRKE |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025818325.1 | 1e-94 | bZIP transcription factor 44-like | ||||
TrEMBL | A0A2S3HV76 | 3e-93 | A0A2S3HV76_9POAL; Uncharacterized protein | ||||
STRING | Pavir.Eb01429.1.p | 3e-79 | (Panicum virgatum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP13757 | 24 | 28 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75390.1 | 4e-11 | basic leucine-zipper 44 |
Link Out ? help Back to Top | |
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Phytozome | Pahal.E02800.1 |