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Plant Transcription
Factor Database
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Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Pahal.E01230.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 467aa MW: 50929 Da PI: 6.4364 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.E01230.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 29.6 | 1.5e-09 | 181 | 221 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45
k rr+++NReAAr+sR+RKka+i++Le +L++ ++L
Pahal.E01230.1 181 KTLRRLAQNREAARKSRLRKKAYIQNLESSRLKLTQLEQEL 221
7889************************9777777666555 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0009410 | Biological Process | response to xenobiotic stimulus |
| GO:0009627 | Biological Process | systemic acquired resistance |
| GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated |
| GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0005737 | Cellular Component | cytoplasm |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 467 aa
Download sequence Send
to blast |
MESRQGGSAA EDAGGAMPSF GPPQHSIHTD MNNMQPSRVT DFGALAQSAG FRIEDLANLN 60
TSTLFNLKPN THTINNNPLQ FGSYGKPISP SHINATTAAT AAARIDPQSL EQQTGAQQNL 120
VALPTGNIEN WGESAMADSP MTDTSTDPDT DERNQMFEQG LVAGPTASDS SDKSRDKLDQ 180
KTLRRLAQNR EAARKSRLRK KAYIQNLESS RLKLTQLEQE LQRARQQGIF ISTSGDQPQS 240
ANGNGALAFD MEYARWLEEH NKHVNELRAA VNAHAGDNDL RGIVDSIMAH YDEIFRLKGV 300
AAKADVFHVL SGMWKTPAER CFMWLGGFRS SELLKLLAGQ LEPLTDQQLV GISNLQQSSQ 360
QAEDALSQGM EALQQALAET LASGSLGPAG SSGNVANYMG QMAMAMGKLG TLENFLRQAD 420
NLRLQTLQQM QRILTTRQSA RALLAISDYF SRLRALSSLW LARPRE*
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| Functional Description ? help
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| Source |
Description |
| UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-TGACG-3'. Recognizes ocs elements like the as-1 motif of the cauliflower mosaic virus 35S promoter. Binding to the as-1-like cis elements mediate auxin- and salicylic acid-inducible transcription. Binds to the hexamer motif 5'-ACGTCA-3' of histone gene promoters. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT034456 | 0.0 | BT034456.1 Zea mays full-length cDNA clone ZM_BFc0173A06 mRNA, complete cds. |
