 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.E00987.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
WRKY |
| Protein Properties |
Length: 341aa MW: 35652.4 Da PI: 5.7864 |
| Description |
WRKY family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.E00987.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | WRKY | 99.5 | 2e-31 | 152 | 208 | 2 | 58 |
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS CS
WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnh 58
+Dgy+WrKYGqK++k++++prsYY+Cts++C +kk+ve+s++dp+++++tYeg H h
Pahal.E00987.1 152 SDGYKWRKYGQKSIKNNPHPRSYYKCTSSRCGAKKHVEKSTDDPEMLVVTYEGPHLH 208
7******************************************************99 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 341 aa
Download sequence Send
to blast |
MGDVLHPQAG TGDVQALWPG DLDEQLITEL LSDDSLLLGA LHPDPGGDSE HCSRDTGASP 60
AAAPAPCDSG GGGAAEQEEL LPQPEAVSRA LCSVYTGPTI RDIEMALSTS RPSYPWSSRR 120
YSPMHLRFGA ASRAPESKYT TKVRSCGGKT PSDGYKWRKY GQKSIKNNPH PRSYYKCTSS 180
RCGAKKHVEK STDDPEMLVV TYEGPHLHGP QPLFPRRQWA SVDLSGAAAA AAAKKQVKTP 240
SPAASSAAPA RASDDAGGWP PNDDHYQMTC GGDAGEAPGN GRAEDAAARR HLAAAADSCD 300
GGSTASVAAA TVLTCDDSPP TAWSCPDFPF AWSPEAPLLL *
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK362686 | 9e-56 | AK362686.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv2009G15. |
| GenBank | DQ863130 | 9e-56 | DQ863130.1 Hordeum vulgare WRKY transcription factor 36 (WRKY36) mRNA, partial cds. |
