 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.D02420.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 189aa MW: 20106.5 Da PI: 10.3615 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.D02420.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 44.6 | 3.2e-14 | 118 | 159 | 5 | 46 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLk 46
+r +r++kNRe+A rsR+RK+a+++ Le k+ +Le+eN +L+
Pahal.D02420.1 118 RRKKRMIKNRESAARSRARKQAYTKDLEIKISQLEEENLRLR 159
799***********************************9887 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 189 aa
Download sequence Send
to blast |
MSSHGSGGGG GAVSRQGSVC SLTFGDADAQ LHGVNLDDLL RAGRKTVDEL YQPGPAPQLG 60
HHHHPAVGRP VPWPLGVGAG PVLDALYYDG HEGGGAAAAA GGKRAGPERG VAERSNERRK 120
KRMIKNRESA ARSRARKQAY TKDLEIKISQ LEEENLRLRG HKAPEPVAQY VPPQEVKSQL 180
RRTNSANF*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | AK361423 | 6e-34 | AK361423.1 Hordeum vulgare subsp. vulgare mRNA for predicted protein, complete cds, clone: NIASHv1140E18. |
