|
Plant Transcription
Factor Database
|
Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.D02046.1 |
Organism |
|
Taxonomic ID |
|
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
Family |
ERF |
Protein Properties |
Length: 252aa MW: 25926.2 Da PI: 4.618 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.D02046.1 | genome | JGI | View CDS |
|
Signature Domain? help Back to Top |
|
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 56.4 | 7.6e-18 | 33 | 78 | 3 | 52 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkk 52
y+GVr + +g+Wv+eIr+p++ + r++lg+f tae+Aa+a++aa++
Pahal.D02046.1 33 YRGVRMRA-WGKWVSEIREPRK---KSRIWLGTFPTAEMAARAHDAAALV 78
9****998.**********843...6*********************985 PP
|
Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 252 aa
Download sequence Send
to blast |
MPDSDVTSSP ASPPGGAVEK RGGKGGGGRR PAYRGVRMRA WGKWVSEIRE PRKKSRIWLG 60 TFPTAEMAAR AHDAAALVVK GPAAVLNFPE IAASLPRPAS AAPRDAAAAR AAAMDVPAAV 120 AGAAAAAVPP AAPQEPPPSP HQQVPDPGQA LVAADPDEEL EEIVELPSID EEALAADDLF 180 WTTASFHVHH DSAAAADPWY EPAAAWMHAA GIAAQVDDMP LVVPGLAADQ LWAPQPDGIV 240 PSGFGALLWN L*
|
Nucleic Localization
Signal ? help
Back to Top |
|
No. |
Start |
End |
Sequence |
1 | 20 | 28 | RGGKGGGGR |
2 | 21 | 27 | GGKGGGG |