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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.D01163.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
NF-YB |
Protein Properties |
Length: 191aa MW: 20610 Da PI: 4.7916 |
Description |
NF-YB family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.D01163.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | NF-YB | 104.2 | 9.1e-33 | 21 | 111 | 7 | 97 |
NF-YB 7 flPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97
+P a v+rim++ P n+ki+ dake v++c +ef + + a + c+r+kr t++gddl++a+ +lGf+dyv pl +yl++yre+eg++
Pahal.D01163.1 21 RIPRATVARIMRHGSPPNSKITGDAKEAVDNCLVEFCAVFIAAAVEECRRDKRTTVTGDDLIFAMRNLGFDDYVRPLALYLRRYREIEGNR 111
6899**********************************99999*********************************************986 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 191 aa
Download sequence Send
to blast |
MDKNQANNHQ DGTDQAPEEL RIPRATVARI MRHGSPPNSK ITGDAKEAVD NCLVEFCAVF 60 IAAAVEECRR DKRTTVTGDD LIFAMRNLGF DDYVRPLALY LRRYREIEGN RPRARHSSMA 120 ALDPTAPAVG AEVQQQQPPP GLNLQLGPPP VRDVTELGPH ADVYAVWRAA AAAAAGTSQA 180 PGGADDEDEE *
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