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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
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| TF ID |
Pahal.D00055.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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| Family |
G2-like |
| Protein Properties |
Length: 473aa MW: 51758.6 Da PI: 6.5775 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.D00055.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 102.2 | 3.4e-32 | 267 | 321 | 1 | 55 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55
k rlrWt eLHerFveav++L G+ekAtPk++l+lmkv+gLt++hvkSHLQkYRl
Pahal.D00055.1 267 KSRLRWTLELHERFVEAVNKLEGPEKATPKAVLKLMKVEGLTIYHVKSHLQKYRL 321
68****************************************************8 PP
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| Sequence ? help Back to Top |
| Protein Sequence Length: 473 aa
Download sequence Send
to blast |
MSSQSVAIGE QIIAPNQIVH ACTSTQTSVH KLFDAKLDHG LLIDDTLSST SQSSNIKTEL 60
IRTSSLSRSL SVNLQKRSPE SDLESPLSHI SHPKFSDPIL SNSSTFCTSL FSSSSKNTDP 120
CRQIGTLPFL PHPPKCEQQV SARQSSSSSL LLNGDTGNAL DEAGKSDDLK DFLTLSGDAS 180
DGSFHGENNT LAFDEQMEFQ FLSEQLGIAI TDNEESPHLD DIYGTPPQLS SLPVSSCSNQ 240
SKQNLGSPVK VQLSSSRSSS DSATTNKSRL RWTLELHERF VEAVNKLEGP EKATPKAVLK 300
LMKVEGLTIY HVKSHLQKYR LAKYLPEPKE DKKASSEDKK AQLGSSSSDS SKTKNLQVAE 360
ALRMQMDVQK QLHEQLEVQR QLQLRIEEHA RYLQKILEEQ QKAGNLSLKA PTKAQAESPE 420
TTSKERSESE GGTTSPRASK NRNPDVDAEC KSPVGSKRTK VQVDPEREAP CS*
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| 3D Structure ? help Back to Top |
 |
| PDB ID |
Evalue |
Query Start |
Query End |
Hit Start |
Hit End |
Description |
| 6j4k_A | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j4k_B | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_A | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_C | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_D | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_F | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_H | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| 6j5b_J | 8e-25 | 267 | 324 | 2 | 59 | Protein PHOSPHATE STARVATION RESPONSE 1 |
| Search in ModeBase |
| Functional Description ? help
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| Source |
Description |
| UniProt | Transcription factor involved in phosphate starvation signaling (PubMed:26082401). Binds to P1BS, an imperfect palindromic sequence 5'-GNATATNC-3', to promote the expression of inorganic phosphate (Pi) starvation-responsive genes (PubMed:26082401). Functionally redundant with PHR1 and PHR2 in regulating Pi starvation response and Pi homeostasis (PubMed:26082401). {ECO:0000269|PubMed:26082401}. |
| Regulation -- Description ? help
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| Source |
Description |
| UniProt | INDUCTION: Up-regulated under Pi starvation conditions. {ECO:0000269|PubMed:26082401}. |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | KF184668 | 1e-172 | KF184668.1 Saccharum hybrid cultivar R570 clone BAC 005I10 complete sequence. |
| GenBank | KF184707 | 1e-172 | KF184707.1 Saccharum hybrid cultivar R570 clone BAC 084G07 complete sequence. |
| GenBank | KF184833 | 1e-172 | KF184833.1 Saccharum hybrid cultivar R570 clone BAC 001I10 complete sequence. |
