 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.C04667.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
bZIP |
| Protein Properties |
Length: 315aa MW: 34040.6 Da PI: 4.7117 |
| Description |
bZIP family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.C04667.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | bZIP_1 | 48.2 | 2.3e-15 | 122 | 175 | 4 | 57 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkeva 57
k+ rr+ +NRe+ArrsR+RK+ + Le v +L++eN +L k+l ++++++
Pahal.C04667.1 122 TKKMRRMLSNRESARRSRKRKQVHMTDLESQVSKLTSENASLLKRLADMTQKYK 175
6999***********************************999966666665554 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 315 aa
Download sequence Send
to blast |
MAGAGADDDV VEVSCGGDGR DPGAYAAVLK RRLDLYCAAV AKSMEAKSQE SSLGYPNSQA 60
SDTSQLISQA SFDDDGDGAT IVTNSNIIDH EDFRGNPANS GTSKEQSDDD GDLEENTDPA 120
NTKKMRRMLS NRESARRSRK RKQVHMTDLE SQVSKLTSEN ASLLKRLADM TQKYKDATLD 180
NRNLTVDVET MRRKVNIAEE AVRRLTGTTL LLSTTCDKTA SSMRLTSCPS DAGSASVTTE 240
DSMEHFLQAQ LQSDLIKLDL PNAAILLTSG EMGTKPDSLQ RVASLEDLQK RIHRDSIHSE 300
IASTFSDPEA LANG*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 135 | 141 | RRSRKRK |
| 2 | 135 | 142 | RRSRKRKQ |
| 3 | 137 | 142 | SRKRKQ |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | BT042103 | 0.0 | BT042103.1 Zea mays full-length cDNA clone ZM_BFb0133G19 mRNA, complete cds. |
| GenBank | KJ727504 | 0.0 | KJ727504.1 Zea mays clone pUT5363 bZIP transcription factor (bZIP111) mRNA, partial cds. |
