![PlantTFDB](images/title_pic.jpg) |
Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C04636.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bHLH |
Protein Properties |
Length: 330aa MW: 34436.7 Da PI: 7.4403 |
Description |
bHLH family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C04636.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
![Signature Domain](draw_signature_domain.php?sp=Pha&pid=Pahal.C04636.1) |
No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | HLH | 46.5 | 6.4e-15 | 160 | 207 | 3 | 55 |
HHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
HLH 3 rahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55
+ah+ E+rRR++iN+++ +L++l+P + K + a++L ++++Y+ksLq
Pahal.C04636.1 160 EAHSLTEKRRRHKINEKLRTLQQLVPGC-----DKSNQASTLDQTIQYMKSLQ 207
58*************************9.....8******************9 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 330 aa
Download sequence Send
to blast |
MNFPGHASGP PWCYADDAGE AAAAGDATGS FTAMIADYST DDPFYLLWEE QGGGAPGSTT 60 TTTQPPEVWR DPPSEDEMAA WLRAIVKGDE LAFTDGGGRE QAAGGQDVPG TKGSSDASAT 120 DKKEKLPMTE QGTMGAKLEM RKPPAGGGST SRRSHPHHGE AHSLTEKRRR HKINEKLRTL 180 QQLVPGCDKS NQASTLDQTI QYMKSLQQHV QAMSFGPARP PAAVYPVVQP HHAPPGVPPA 240 VDVPMMPAAP VVLAPAPTMV VPFGAMLQLP HYPAAGVPVM MPAAAAAPLY PAARAAAAPE 300 SARSSASHRR GSSSSSSKEK GGGSLRMKH*
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