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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.C04543.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 397aa MW: 42336.5 Da PI: 4.1745 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C04543.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 59.8 | 6.3e-19 | 50 | 99 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkkleg 55
++ GVr+++ +grWvAeI+d ++ r++lg+f+taeeAa+a+++a+ l+g
Pahal.C04543.1 50 RFVGVRQRP-SGRWVAEIKDtI----QKIRVWLGTFDTAEEAARAYDEAACLLRG 99
789******.7*********33....35**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 397 aa
Download sequence Send
to blast |
MARKRKASDS VDIEVGNDVL NSPPLLPSTD ACAWVSVAVA AAAQQRGRKR FVGVRQRPSG 60 RWVAEIKDTI QKIRVWLGTF DTAEEAARAY DEAACLLRGS NTRTNFWPRP SPAAVAAAAA 120 HPVQPPPPLP AVASSPAPAL PPKVTNLLLL RLRARNQQLF NATAAQQEAA LLQGPLCEGK 180 YGGGDGEECA FQVDDFLSYD CGSSDGNSSQ EMEDEEEEEE EEEEEEELDF QFMDQHAASP 240 TAGCEGGLCS PFDVVAAELG GAVEADDGEP ESAVQELMRR RMDYERKISA SLYALSGVSE 300 CLRMRHGDDA AAGVRDQLTG LREACRKKQR DEVQQQHQEQ APSPESAEDG NGKAAQEECS 360 AGSGAPEAAS SSSEASDGDG DSDVLLWSSL DLAPIC*
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