 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
Back to Top |
| TF ID |
Pahal.C04435.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
|
| Family |
Dof |
| Protein Properties |
Length: 339aa MW: 34400.5 Da PI: 8.8753 |
| Description |
Dof family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Pahal.C04435.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | zf-Dof | 120.8 | 4.7e-38 | 108 | 165 | 5 | 62 |
zf-Dof 5 alkcprCdstntkfCyynnyslsqPryfCkaCrryWtkGGalrnvPvGggrrknkkss 62
+l+cprCdstntkfCy+nnyslsqPr+fCkaCrryWt+GGalrnvPvGgg+r+n k+s
Pahal.C04435.1 108 TLRCPRCDSTNTKFCYFNNYSLSQPRHFCKACRRYWTRGGALRNVPVGGGCRRNTKRS 165
679***************************************************9886 PP
|
| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0044212 | Molecular Function | transcription regulatory region DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 339 aa
Download sequence Send
to blast |
MVFSSLPIFL DPPNWGQMQM QQQQPPLQCL LGGGGGSDHH HLMPPPSGLA PLPGGPADTA 60
ASAPAGGNSS TSMQTAAGVA AAGAQPRPVV SMAERARLAR VPLPEPGTLR CPRCDSTNTK 120
FCYFNNYSLS QPRHFCKACR RYWTRGGALR NVPVGGGCRR NTKRSSKKSS RGGQGGGAGA 180
TAATSSSSTT STTATSTTTT SAAMAAAEAI ASMQAQLPHL GLPPAAAAAA LEASLEGYHH 240
YLPLQMQPQF LQQAGLHGYH FADDGSGVLA DGFPRGVVAS GLLAQLAAVK MEEHSSGGGG 300
GAVAAHEQSY WPGSTGGGSG WPAEFLSGFS SSSSGNVL*
|
| Annotation --
Nucleotide ? help
Back to Top |
| Source |
Hit ID |
E-value |
Description |
| GenBank | KC582419 | 0.0 | KC582419.1 Sorghum bicolor dof28 protein (dof28) gene, complete cds. |
