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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C04322.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
bZIP |
Protein Properties |
Length: 568aa MW: 60290.2 Da PI: 6.3642 |
Description |
bZIP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C04322.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | bZIP_1 | 44.4 | 3.6e-14 | 115 | 174 | 3 | 62 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62
e kr r+ +NRe+A sRqRKk+++eeLe kvk+++a +L +++ + e lk++
Pahal.C04322.1 115 EAKRRARLVRNRESAHLSRQRKKQYVEELEGKVKAMQATIADLSARISCVTAENTVLKQQ 174
78*********************************************9999999888887 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 568 aa
Download sequence Send
to blast |
MAEPTLLAPD PFADLPFPEF QAPVDGGNFA FEDFDLEDLD LDVDFDLDLF ASDGQLSQPP 60 PLATSSSTAG SPEGGSSSSG AGGDGGLRNE ESSESCSRSA SVTDGSGKGK GEDDEAKRRA 120 RLVRNRESAH LSRQRKKQYV EELEGKVKAM QATIADLSAR ISCVTAENTV LKQQLGGAAG 180 TAPPLPMYPA VYPLPMPWMH PAYAMRGSQV PLVPIPRLKP QQPAPATAEP PAKKARKTKK 240 VASVSLLGLL CLVMLCGCLI PAVNRMYGSV DGGEGAAFGP SHHGRVLAVE GPRDSVSDSI 300 DPKPPQSTSE TLPALLYLPK NGKHVKINGN LVIKSIVASE KASLRMSGYD GKSPRNQGKE 360 ETSLAIPGYV ASLEAGEVMD STTGMKNKPM ALAPADGNMY REDDGLLPQW FSEAMSGPLL 420 SSGMCTEVFQ FDVSPSSAHA NGIVPVYSNA MPNSMQNFTE NLPSAHPHTV KNRRISYSEA 480 IPLRGSTSNN TERLKTPPKN ESFGSMKPVS SVVVSVLADP REVGEGNGEG RISSKSLSRI 540 FVVVLIDSVK YVTYSCVLPF KNHSPHL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcription factor involved in endoplasmic reticulum (ER) stress response. Acts as ER stress sensor and activates the transcription factor BZIP50 and the chaperone BIP1. {ECO:0000269|PubMed:22050533}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By dithiothreitol- and tunicamycin-induced endoplasmic reticulum (ER) stress response. {ECO:0000305|PubMed:22050533}. |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | EU973938 | 0.0 | EU973938.1 Zea mays clone 424664 DNA binding protein mRNA, complete cds. |
Publications
? help Back to Top |
- Kikuchi S, et al.
Collection, mapping, and annotation of over 28,000 cDNA clones from japonica rice. Science, 2003. 301(5631): p. 376-9 [PMID:12869764] - Oono Y, et al.
Analysis of ER stress in developing rice endosperm accumulating beta-amyloid peptide. Plant Biotechnol. J., 2010. 8(6): p. 691-718 [PMID:20331531] - Hu J, et al.
The Bphi008a gene interacts with the ethylene pathway and transcriptionally regulates MAPK genes in the response of rice to brown planthopper feeding. Plant Physiol., 2011. 156(2): p. 856-72 [PMID:21487048] - Takahashi H,Kawakatsu T,Wakasa Y,Hayashi S,Takaiwa F
A rice transmembrane bZIP transcription factor, OsbZIP39, regulates the endoplasmic reticulum stress response. Plant Cell Physiol., 2012. 53(1): p. 144-53 [PMID:22084314] - Ohta M, et al.
Analysis of rice ER-resident J-proteins reveals diversity and functional differentiation of the ER-resident Hsp70 system in plants. J. Exp. Bot., 2013. 64(18): p. 5429-41 [PMID:24153418] - Cheng Q, et al.
An alternatively spliced heat shock transcription factor, OsHSFA2dI, functions in the heat stress-induced unfolded protein response in rice. Plant Biol (Stuttg), 2015. 17(2): p. 419-29 [PMID:25255693]
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