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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C03622.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 378aa MW: 40787.4 Da PI: 4.9981 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C03622.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 64.4 | 2.3e-20 | 129 | 180 | 1 | 56 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkklege 56
+gy+GVr++ +g+WvAeIr+p + r r +lg+f tae+Aa+a+++a+++++ge
Pahal.C03622.1 129 CGYRGVRQRT-WGKWVAEIREP---N-RvNRLWLGTFPTAEDAARAYDEAARAMYGE 180
79*****999.**********8...2.489************************996 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0009408 | Biological Process | response to heat |
GO:0009414 | Biological Process | response to water deprivation |
GO:0009651 | Biological Process | response to salt stress |
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated |
GO:0005634 | Cellular Component | nucleus |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 378 aa
Download sequence Send
to blast |
MTVDQKQAMP MQAQALQPGR TFGAEGSTVV LGSVRTIGGR ALRSNEYELS VEQKSQGDAP 60 PVASNLWKKR PRRSRDGPTS VAAVIKRWAE HNKLLEHGAE GAKRARKAPA KGSKKGCMKG 120 KGGPENTQCG YRGVRQRTWG KWVAEIREPN RVNRLWLGTF PTAEDAARAY DEAARAMYGE 180 VARTNFPRQS AATSSQVAPA AASTQVAAVV DSLLPSTSCE STTTSNHSDI ASTALKPEVA 240 DISSSLKVEY PMEAGSHRSE MISGSWVQHE DSHPSSTQAS TPNVADKEVF EPLEPIANIP 300 EGEDDGFDIE EMLRMMEADP QNKGGVDASM GQPFYLDGLD SSVLESMLQS EPEPYSMSEE 360 TDMFLAGFES PGFFEGL*
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Functional Description ? help
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Source |
Description |
UniProt | Transcriptional activator that binds specifically to the DNA sequence 5'-[AG]CCGAC-3' of the cis-acting dehydration-responsive element (DRE). Binding to the C-repeat/DRE element mediates high salinity- and dehydration-inducible transcription. Involved in drought and heat-shock stress tolerance. {ECO:0000269|PubMed:20049613}. |
Regulation -- Description ? help
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Source |
Description |
UniProt | INDUCTION: By heat shock, high-salt and drought stresses. {ECO:0000269|PubMed:20049613}. |