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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C02968.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 206aa MW: 20693 Da PI: 9.2599 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C02968.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 49.2 | 1.3e-15 | 17 | 67 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
+ y+GVr++ +g+Wv+eIr+p + r r +lg++ +e Aa a++aa+ l+g
Pahal.C02968.1 17 CPYRGVRRRA-WGKWVSEIRVPGT---RERLWLGSYAAPEAAAVAHDAAACLLRG 67
67*****777.**********943...5**********************99987 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 206 aa
Download sequence Send
to blast |
MSRAAGGGGG RGAERRCPYR GVRRRAWGKW VSEIRVPGTR ERLWLGSYAA PEAAAVAHDA 60 AACLLRGLPG AAAAGHLNFP ERAACYGGRR GRAPPLSPRS VQRVASDAGM AADAWAALAS 120 SSPLLRNAAG TTAGAAREGE SATGAAAQGA PYAPALPPYS NCSSSGSSTY WCTPSAGGGS 180 GSSSAGSDQQ LVYGDISVDD IEILM*
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Functional Description ? help
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Source |
Description |
UniProt | Probably acts as a transcriptional activator. Binds to the GCC-box pathogenesis-related promoter element. May be involved in the regulation of gene expression by stress factors and by components of stress signal transduction pathways (By similarity). {ECO:0000250}. |