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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.C02628.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 223aa MW: 23605.1 Da PI: 6.1504 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C02628.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 58.8 | 1.3e-18 | 61 | 109 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55
y+GVr+++ +g+WvAeIr+p+ + +r++lg+f t+ +Aa a+++a++++ g
Pahal.C02628.1 61 YRGVRQRP-WGKWVAEIREPN----SgRRHWLGTFSTPVDAALAYDRAAEAFLG 109
9*******.**********93....35**********************99877 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 223 aa
Download sequence Send
to blast |
MGVGPGRKEM GRAAAAPTSR ATGTHQARVN GSANAKPGSG SRRSRSGQRG PGGPDNMRHN 60 YRGVRQRPWG KWVAEIREPN SGRRHWLGTF STPVDAALAY DRAAEAFLGN LAHLNFPADH 120 AAAVTVATAA PAQWQPASCS PAPATTADVF EENEVKPLID VAQGGAGAEV ASQPQQQGAS 180 WLSPEPLLDD DPDDISMYID FDAVDHMMPC YHGIKVEDCQ PD*
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