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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C02347.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
CPP |
Protein Properties |
Length: 361aa MW: 39972.1 Da PI: 8.0963 |
Description |
CPP family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C02347.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | TCR | 43.9 | 4.9e-14 | 68 | 105 | 3 | 40 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNke 40
+k+C Ckks+Clk+YC Cfa g +Cse+C C+ C+Nk+
Pahal.C02347.1 68 CKHCACKKSRCLKLYCPCFAGGGYCSEKCGCQPCFNKD 105
89**********************************97 PP
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2 | TCR | 49.9 | 6.1e-16 | 153 | 189 | 3 | 39 |
TCR 3 kkgCnCkkskClkkYCeCfaagkkCseeCkCedCkNk 39
k+gCnCkks+ClkkYC+C+++g+ Cs C+C+dC+N
Pahal.C02347.1 153 KRGCNCKKSSCLKKYCDCYQDGTGCSLFCRCDDCQNP 189
78**********************************6 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 361 aa
Download sequence Send
to blast |
MEATPISVKP PSPPPAAPPP AALEPRDLPT HAGAATEVEP SSMNQLAVAV TPDPKRQKVE 60 ETADGNGCKH CACKKSRCLK LYCPCFAGGG YCSEKCGCQP CFNKDAYAET VQTTRKVLLS 120 RQKRMSLKIN RRSEANAEAM EDAHHSSSST PPKRGCNCKK SSCLKKYCDC YQDGTGCSLF 180 CRCDDCQNPF GKNEGIMAED SKRYLYTGAD LDHSEGEHEF VVERSPRLQS PISKESSFHQ 240 TPPHLRASSR EAHVFPQAVS HWQALPRSWH CSNKRNNNDR AMDDSANYKN SNNDWQLPKH 300 EDSYSISKCV QILNGMVELS QVEKSVAPDV FLLPGNREIF ISLGGDVRAL WLKRKIQHLT 360 *
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Best hit in Arabidopsis thaliana ? help
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Hit ID |
E-value |
Description |
AT3G22760.1 | 8e-47 | Tesmin/TSO1-like CXC domain-containing protein |