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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
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TF ID |
Pahal.C01944.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
ERF |
Protein Properties |
Length: 266aa MW: 28678.1 Da PI: 7.9361 |
Description |
ERF family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C01944.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | AP2 | 61.3 | 2.2e-19 | 112 | 163 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrd.psengkrkrfslgkfgtaeeAakaaiaarkklege 56
y+GVr+++ +g+++AeIrd + k +r++lg+f taeeAa a+++a+++++g+
Pahal.C01944.1 112 SYRGVRRRP-WGKFAAEIRDtRR---KGARVWLGTFTTAEEAALAYDKAALRMRGP 163
69*******.**********332...34**************************95 PP
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Gene Ontology ? help Back to Top |
GO Term |
GO Category |
GO Description |
GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
GO:0010200 | Biological Process | response to chitin |
GO:0003677 | Molecular Function | DNA binding |
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
Protein Sequence Length: 266 aa
Download sequence Send
to blast |
MAIGAPGSHQ PNNEAANILE NVWATIMTES ATPASSTAAS SEVGEEKPEA ILQRLPSLGR 60 WISMGAEEWD ELLLGGTALT SDASGELLVA SPASQEDRRD RRASSKAVAC KSYRGVRRRP 120 WGKFAAEIRD TRRKGARVWL GTFTTAEEAA LAYDKAALRM RGPRAHLNFP LDVVQRELAG 180 NGCVEASRVL RRRRRRGNNA AAVDTRSNGS VSATGGCDQT MVSFACGKKD QGTSMVQERS 240 MSDPGAVIEF EDIGGEYWDY LFAPL*
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Nucleic Localization
Signal ? help
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No. |
Start |
End |
Sequence |
1 | 187 | 195 | RVLRRRRRR |
Annotation --
Nucleotide ? help
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Source |
Hit ID |
E-value |
Description |
GenBank | KU685412 | 1e-145 | KU685412.1 Saccharum spontaneum clone SES23E05, complete sequence. |