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Plant Transcription
Factor Database
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Transcription Factor Information
Basic
Information? help
Back to Top |
TF ID |
Pahal.C01159.1 |
Organism |
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Taxonomic ID |
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Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; PACMAD clade; Panicoideae; Panicodae; Paniceae; Panicinae; Panicum
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Family |
LBD |
Protein Properties |
Length: 213aa MW: 22095.1 Da PI: 6.4918 |
Description |
LBD family protein |
Gene Model |
Gene Model ID |
Type |
Source |
Coding Sequence |
Pahal.C01159.1 | genome | JGI | View CDS |
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Signature Domain? help Back to Top |
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No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
1 | DUF260 | 136.7 | 8.7e-43 | 37 | 136 | 1 | 100 |
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95
+CaaCk+lrr+C++ Cvlapyfp ++p+kfa +h++FGasn++kll++lpee+r da+ss+vyeA ar+rdPvyG++g i +lq+q++ lka+la
Pahal.C01159.1 37 PCAACKILRRRCVDRCVLAPYFPPTEPHKFATAHRVFGASNIIKLLQELPEEHRADAVSSMVYEASARIRDPVYGCAGAICQLQKQVNDLKAQLA 131
7********************************************************************************************** PP
DUF260 96 llkee 100
++++e
Pahal.C01159.1 132 RAHAE 136
*9987 PP
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Sequence ? help Back to Top |
Protein Sequence Length: 213 aa
Download sequence Send
to blast |
MDSSSSDTAA TAALPPGGAS TPPTSPQPQQ PAVVLSPCAA CKILRRRCVD RCVLAPYFPP 60 TEPHKFATAH RVFGASNIIK LLQELPEEHR ADAVSSMVYE ASARIRDPVY GCAGAICQLQ 120 KQVNDLKAQL ARAHAELAGA RAQHAHLLAL LCVEVAAASS PAYCAVDYPS AQLAAAAPAA 180 QADALYVIDG GSGSGLQLQS SPVSWADEPL WT*
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